Continues on from #19202.
Following the addition of pprof labels we can now more easily understand the relationship between a goroutine and the requests that spawn them.
This PR takes advantage of the labels and adds a few others, then provides a mechanism for the monitoring page to query the pprof goroutine profile.
The binary profile that results from this profile is immediately piped in to the google library for parsing this and then stack traces are formed for the goroutines.
If the goroutine is within a context or has been created from a goroutine within a process context it will acquire the process description labels for that process.
The goroutines are mapped with there associate pids and any that do not have an associated pid are placed in a group at the bottom as unbound.
In this way we should be able to more easily examine goroutines that have been stuck.
A manager command `gitea manager processes` is also provided that can export the processes (with or without stacktraces) to the command line.
Signed-off-by: Andrew Thornton <art27@cantab.net>
So whilst #19225 fixes one issue it caused another. We need to initialise the Git
module first.
Related #19225Fix#19162
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: 6543 <6543@obermui.de>
The RepoIndexerTest is failing with considerable frequency due to a race inherrent in
its design. This PR adjust this test to avoid the reliance on waiting for the populate
repo indexer to run and forcibly adds the repo to the queue. It then flushes the queue.
It may be worth separating out the tests somewhat by testing the Index function
directly away from the queue however, this forceful method should solve the current
problem.
Signed-off-by: Andrew Thornton <art27@cantab.net>
Repositories missing their directory should not report an error from the stats
indexer.
Close#18847
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
We can't depend on `latest` version of gofumpt because the output will
not be stable across versions. Lock it down to the latest version
released yesterday and run it again.
* Start adding mechanism to return unhandled data
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Create pushback interface
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Add Pausable interface to WorkerPool and Manager
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Implement Pausable and PushBack for the bytefifos
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Implement Pausable and Pushback for ChannelQueues and ChannelUniqueQueues
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Wire in UI for pausing
Signed-off-by: Andrew Thornton <art27@cantab.net>
* add testcases and fix a few issues
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix build
Signed-off-by: Andrew Thornton <art27@cantab.net>
* prevent "race" in the test
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix jsoniter mismerge
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix conflicts
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix format
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Add warnings for no worker configurations and prevent data-loss with redis/levelqueue
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Use StopTimer
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Co-authored-by: wxiaoguang <wxiaoguang@gmail.com>
This PR continues the work in #17125 by progressively ensuring that git
commands run within the request context.
This now means that the if there is a git repo already open in the context it will be used instead of reopening it.
Signed-off-by: Andrew Thornton <art27@cantab.net>
This PR contains multiple fixes. The most important of which is:
* Prevent hang in git cat-file if the repository is not a valid repository
Unfortunately it appears that if git cat-file is run in an invalid
repository it will hang until stdin is closed. This will result in
deadlocked /pulls pages and dangling git cat-file calls if a broken
repository is tried to be reviewed or pulls exists for a broken
repository.
Fix#14734Fix#9271Fix#16113
Otherwise there are a few small other fixes included which this PR was initially intending to fix:
* Fix panic on partial compares due to missing PullRequestWorkInProgressPrefixes
* Fix links on pulls pages due to regression from #17551 - by making most /issues routes match /pulls too - Fix#17983
* Fix links on feeds pages due to another regression from #17551 but also fix issue with syncing tags - Fix#17943
* Add missing locale entries for oauth group claims
* Prevent NPEs if ColorFormat is called on nil users, repos or teams.
* Add missing `X-Total-Count` and fix some related bugs
Adds `X-Total-Count` header to APIs that return a list but doesn't have it yet.
Fixed bugs:
* not returned after reporting error (39eb82446c/routers/api/v1/user/star.go (L70))
* crash with index out of bounds, API issue/issueSubscriptions
I also found various endpoints that return lists but do not apply/support pagination yet:
```
/repos/{owner}/{repo}/issues/{index}/labels
/repos/{owner}/{repo}/issues/comments/{id}/reactions
/repos/{owner}/{repo}/branch_protections
/repos/{owner}/{repo}/contents
/repos/{owner}/{repo}/hooks/git
/repos/{owner}/{repo}/issue_templates
/repos/{owner}/{repo}/releases/{id}/assets
/repos/{owner}/{repo}/reviewers
/repos/{owner}/{repo}/teams
/user/emails
/users/{username}/heatmap
```
If this is not expected, an new issue should be opened.
Closes#13043
* fmt
* Update routers/api/v1/repo/issue_subscription.go
Co-authored-by: KN4CK3R <admin@oldschoolhack.me>
* Use FindAndCount
Co-authored-by: KN4CK3R <admin@oldschoolhack.me>
Co-authored-by: 6543 <6543@obermui.de>
* Some refactors related repository model
* Move more methods out of repository
* Move repository into models/repo
* Fix test
* Fix test
* some improvements
* Remove unnecessary function
This PR registers requests with the process manager and manages hierarchy within the processes.
Git repos are then associated with a context, (usually the request's context) - with sub commands using this context as their base context.
Signed-off-by: Andrew Thornton <art27@cantab.net>
Use check attribute code to check the assigned language of a file and send that in to
chroma as a hint for the language of the file.
Signed-off-by: Andrew Thornton <art27@cantab.net>
The functioning of the code indexer queue really only makes sense as an unique queue
and doing this allows use to simplify the indexer data to simply delete the data if
the repo is no longer in the db.
Signed-off-by: Andrew Thornton <art27@cantab.net>
The io/ioutil package has been deprecated as of Go 1.16, see
https://golang.org/doc/go1.16#ioutil. This commit replaces the existing
io/ioutil functions with their new definitions in io and os packages.
Signed-off-by: Eng Zer Jun <engzerjun@gmail.com>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
* Ignore Sync errors on pipes when doing `CheckAttributeReader.CheckPath`
* apply env patch
* Drop the Sync and fix a number of issues with the Close function
Signed-off-by: Andrew Thornton <art27@cantab.net>
* add logs for DBIndexer and CheckPath
* Fix some more closing bugs
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Add test case for language_stats
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Update modules/indexer/stats/db.go
Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: 6543 <6543@obermui.de>
* Improve get last commit using git log --name-status
git log --name-status -c provides information about the diff between a
commit and its parents. Using this and adjusting the algorithm to use
the first change to a path allows for a much faster generation of commit
info.
There is a subtle change in the results generated but this will cause
the results to more closely match those from elsewhere.
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Co-authored-by: Lauris BH <lauris@nix.lv>
* Added type sniffer.
* Switched content detection from base to typesniffer.
* Added GuessContentType to Blob.
* Moved image info logic to client.
Added support for SVG images in diff.
* Restore old blocked svg behaviour.
* Added missing image formats.
* Execute image diff only when container is visible.
* add margin to spinner
* improve BIN tag on image diffs
* Default to render view.
* Show image diff on incomplete diff.
Co-authored-by: silverwind <me@silverwind.io>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Co-authored-by: Lauris BH <lauris@nix.lv>
* move shutdownfns, terminatefns and hammerfns out of separate goroutines
Coalesce the shutdownfns etc into a list of functions that get run at shutdown
rather then have them run at goroutines blocked on selects.
This may help reduce the background select/poll load in certain
configurations.
* The LevelDB queues can actually wait on empty instead of polling
Slight refactor to cause leveldb queues to wait on empty instead of polling.
* Shutdown the shadow level queue once it is empty
* Remove bytefifo additional goroutine for readToChan as it can just be run in run
* Remove additional removeWorkers goroutine for workers
* Simplify the AtShutdown and AtTerminate functions and add Channel Flusher
* Add shutdown flusher to CUQ
* move persistable channel shutdown stuff to Shutdown Fn
* Ensure that UPCQ has the correct config
* handle shutdown during the flushing
* reduce risk of race between zeroBoost and addWorkers
* prevent double shutdown
Signed-off-by: Andrew Thornton <art27@cantab.net>
#15546 doesn't completely fix this problem because the error returned is an ObjectNotExist
error not a BranchNotExist error.
Add test for ErrObjectNotExist too
Fix#15257
Signed-off-by: Andrew Thornton <art27@cantab.net>
* If the default branch is not present do not report error on stats indexing
Fix#15257
Signed-off-by: Andrew Thornton <art27@cantab.net>
* as per lunny
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
`enry.IsVendor` is kinda slow as it simply iterates across all regexps.
This PR ajdusts the regexps to combine them to make this process a
little quicker.
Related #15143
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Extract out the common cat-file batch calls
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Move bleve and elastic indexers to use a common cat-file --batch when indexing
Signed-off-by: Andrew Thornton <art27@cantab.net>
* move catfilebatch to batch_reader and rename to batch_reader.go
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: Lauris BH <lauris@nix.lv>
* Reduce calls to git cat-file -s
There are multiple places where there are repeated calls to git cat-file
-s due to the blobs not being created with their size.
Through judicious use of git ls-tree -l and slight adjustments to the
indexer code we can avoid a lot of these calls.
* simplify by always expecting the long format
* Also always set the sized field and tell the indexer the update is sized
* Move last commit cache back into modules/git
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Remove go-git from the interface for last commit cache
Signed-off-by: Andrew Thornton <art27@cantab.net>
* move cacheref to last_commit_cache
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Remove go-git from routers/private/hook
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Move FindLFSFiles to pipeline
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Make no-go-git variants
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Submodule RefID
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix issue with GetCommitsInfo
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix GetLastCommitForPaths
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Improve efficiency
Signed-off-by: Andrew Thornton <art27@cantab.net>
* More efficiency
Signed-off-by: Andrew Thornton <art27@cantab.net>
* even faster
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Reduce duplication
* As per @lunny
Signed-off-by: Andrew Thornton <art27@cantab.net>
* attempt to fix drone
Signed-off-by: Andrew Thornton <art27@cantab.net>
* fix test-tags
Signed-off-by: Andrew Thornton <art27@cantab.net>
* default to use no-go-git variants and add gogit build tag
Signed-off-by: Andrew Thornton <art27@cantab.net>
* placate lint
Signed-off-by: Andrew Thornton <art27@cantab.net>
* as per @6543
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Refactor Logger to make a logger interface and make it possible to
wrap loggers for specific purposes.
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
* Support elastic search for code search
* Finished elastic search implementation and add some tests
* Enable test on drone and added docs
* Add new fields to elastic search
* Fix bug
* remove unused changes
* Use indexer alias to keep the gitea indexer version
* Improve codes
* Some code improvements
* The real indexer name changed to xxx.v1
Co-authored-by: zeripath <art27@cantab.net>
Replace all calls to os.Remove/os.RemoveAll by retrying util.Remove/util.RemoveAll and remove circular dependencies from util.
Fix#12339
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: silverwind <me@silverwind.io>
* Fix incorrect logging in oauth2.go
Fix#11945
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Handle ErrAlreadyInQueue in stats indexer
Fix#12380
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Fixes type in error message of indexer
Add the missing character in the error message.
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Co-authored-by: Lieven Hollevoet <hollie@lika.be>
* Server-side syntax hilighting for all code
This PR does a few things:
* Remove all traces of highlight.js
* Use chroma library to provide fast syntax hilighting directly on the server
* Provide syntax hilighting for diffs
* Re-style both unified and split diffs views
* Add custom syntax hilighting styling for both regular and arc-green
Fixes#7729Fixes#10157Fixes#11825Fixes#7728Fixes#3872Fixes#3682
And perhaps gets closer to #9553
* fix line marker
* fix repo search
* Fix single line select
* properly load settings
* npm uninstall highlight.js
* review suggestion
* code review
* forgot to call function
* fix test
* Apply suggestions from code review
suggestions from @silverwind thanks
Co-authored-by: silverwind <me@silverwind.io>
* code review
* copy/paste error
* Use const for highlight size limit
* Update web_src/less/_repository.less
Co-authored-by: Lauris BH <lauris@nix.lv>
* update size limit to 1MB and other styling tweaks
* fix highlighting for certain diff sections
* fix test
* add worker back as suggested
Co-authored-by: silverwind <me@silverwind.io>
Co-authored-by: Lauris BH <lauris@nix.lv>
* Change language statistics to save size instead of percentage in database
Co-Authored-By: Cirno the Strongest <1447794+CirnoT@users.noreply.github.com>
* Do not exclude if only language
* Fix edge cases with special langauges
Co-authored-by: Cirno the Strongest <1447794+CirnoT@users.noreply.github.com>
Move langauge detection to separate module to be more reusable
Add option to disable vendored file exclusion from file search
Allways show all language stats for search
* Implementation for calculating language statistics
Impement saving code language statistics to database
Implement rendering langauge stats
Add primary laguage to show in repository list
Implement repository stats indexer queue
Add indexer test
Refactor to use queue module
* Do not timeout for queues
Instead of just adding test generated files to .gitignore prevent
them from being produced in the first place.
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
* Wrap the code indexer
In order to prevent a data race in the code indexer it must be wrapped
with a holder otherwise it is possible to Search/Index on an
incompletely initialised indexer, and search will fail with a nil
pointer until the repository indexer is initialised.
Further a completely initialised repository indexer should not be closed
until Termination otherwise actions in Hammer/Shutdown phases could
block or be lost.
Finally, there is a complex dance of shutdown etiquette should the index
initialisation fail. This PR restores that.
* Always return err if closed whilst waiting
Co-authored-by: techknowlogick <matti@mdranta.net>
* Change graceful to use a singleton obtained through GetManager instead of a global.
* Graceful: Make TestPullRequests shutdownable
* Graceful: Make the cron tasks graceful
* Graceful: AddTestPullRequest run in graceful ctx
* Graceful: SyncMirrors shutdown
* Graceful: SetDefaultContext for Xorm to be HammerContext
* Avoid starting graceful for migrate commands and checkout
* Graceful: DeliverHooks now can be shutdown
* Fix multiple syncing errors in modules/sync/UniqueQueue & Make UniqueQueue closable
* Begin the process of making the repo indexer shutdown gracefully
* Graceful Shutdown for windows and others
Restructures modules/graceful, adding shutdown for windows, removing and
replacing the old minwinsvc code.
Creates a new waitGroup - terminate which allows for goroutines to
finish up after the shutdown of the servers.
Shutdown and terminate hooks are added for goroutines.
* Remove unused functions - these can be added in a different PR
* Add startup timeout functionality
* Document STARTUP_TIMEOUT
* in progress changes for #7405, added ability to add cross-repo dependencies
* removed unused repolink var
* fixed query that was breaking ci tests; fixed check in issue dependency add so that the id of the issue and dependency is checked rather than the indexes
* reverted removal of string in local files becasue these are done via crowdin, not updated manually
* removed 'Select("issue.*")' from getBlockedByDependencies and getBlockingDependencies based on comments in PR review
* changed getBlockedByDependencies and getBlockingDependencies to use a more xorm-like query, also updated the sidebar as a result
* simplified the getBlockingDependencies and getBlockedByDependencies methods; changed the sidebar to show the dependencies in a different format where you can see the name of the repository
* made some changes to the issue view in the dependencies (issue name on top, repo full name on separate line). Change view of issue in the dependency search results (also showing the full repo name on separate line)
* replace call to FindUserAccessibleRepoIDs with SearchRepositoryByName. The former was hardcoded to use isPrivate = false on the repo search, but this code needed it to be true. The SearchRepositoryByName method is used more in the code including on the user's dashboard
* some more tweaks to the layout of the issues when showing dependencies and in the search box when you add new dependencies
* added Name to the RepositoryMeta struct
* updated swagger doc
* fixed total count for link header on SearchIssues
* fixed indentation
* fixed aligment of remove icon on dependencies in issue sidebar
* removed unnecessary nil check (unnecessary because issue.loadRepo is called prior to this block)
* reverting .css change, somehow missed or forgot that less is used
* updated less file and generated css; updated sidebar template with styles to line up delete and issue index
* added ordering to the blocked by/depends on queries
* fixed sorting in issue dependency search and the depends on/blocks views to show issues from the current repo first, then by created date descending; added a "all cross repository dependencies" setting to allow this feature to be turned off, if turned off, the issue dependency search will work the way it did before (restricted to the current repository)
* re-applied my swagger changes after merge
* fixed split string condition in issue search
* changed ALLOW_CROSS_REPOSITORY_DEPENDENCIES description to sound more global than just the issue dependency search; returning 400 in the cross repo issue search api method if not enabled; fixed bug where the issue count did not respect the state parameter
* when adding a dependency to an issue, added a check to make sure the issue and dependency are in the same repo if cross repo dependencies is not enabled
* updated sortIssuesSession call in PullRequests, another commit moved this method from pull.go to pull_list.go so I had to re-apply my change here
* fixed incorrect setting of user id parameter in search repos call
* Prevent deadlock in indexer initialisation during graceful restart
* Move from gracehttp to our own service to add graceful ssh
* Add timeout for start of indexers and make hammer time configurable
* Fix issue with re-initialization in indexer during tests
* move the code to detect use of closed to graceful
* Handle logs gracefully - add a pid suffix just before restart
* Move to using a cond and a holder for indexers
* use time.Since
* Add some comments and attribution
* update modules.txt
* Use zero to disable timeout
* Move RestartProcess to its own file
* Add cleanup routine
* Convert files to utf-8 for indexing
* Move utf8 functions to modules/base
* Bump repoIndexerLatestVersion to 3
* Add tests for base/encoding.go
* Changes to pass gosimple
* Move UTF8 funcs into new modules/charset package
* Make repository indexer tokenize by camel case selectable
* Revert "Make repository indexer tokenize by camel case selectable"
This reverts commit a8d4e40af5.
* Remove app.ini setting, permanently remove camel case tokenizer
* Increase repoIndexerLatestVersion to force indexes to be rebuilt
* Changes introduced by the commmand make vendor
* Panic don't fatal on create new logger
Fixes#5854
Signed-off-by: Andrew Thornton <art27@cantab.net>
* partial broken
* Update the logging infrastrcture
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Reset the skip levels for Fatal and Error
Signed-off-by: Andrew Thornton <art27@cantab.net>
* broken ncsa
* More log.Error fixes
Signed-off-by: Andrew Thornton <art27@cantab.net>
* Remove nal
* set log-levels to lowercase
* Make console_test test all levels
* switch to lowercased levels
* OK now working
* Fix vetting issues
* Fix lint
* Fix tests
* change default logging to match current gitea
* Improve log testing
Signed-off-by: Andrew Thornton <art27@cantab.net>
* reset error skip levels to 0
* Update documentation and access logger configuration
* Redirect the router log back to gitea if redirect macaron log but also allow setting the log level - i.e. TRACE
* Fix broken level caching
* Refactor the router log
* Add Router logger
* Add colorizing options
* Adjust router colors
* Only create logger if they will be used
* update app.ini.sample
* rename Attribute ColorAttribute
* Change from white to green for function
* Set fatal/error levels
* Restore initial trace logger
* Fix Trace arguments in modules/auth/auth.go
* Properly handle XORMLogger
* Improve admin/config page
* fix fmt
* Add auto-compression of old logs
* Update error log levels
* Remove the unnecessary skip argument from Error, Fatal and Critical
* Add stacktrace support
* Fix tests
* Remove x/sync from vendors?
* Add stderr option to console logger
* Use filepath.ToSlash to protect against Windows in tests
* Remove prefixed underscores from names in colors.go
* Remove not implemented database logger
This was removed from Gogs on 4 Mar 2016 but left in the configuration
since then.
* Ensure that log paths are relative to ROOT_PATH
* use path.Join
* rename jsonConfig to logConfig
* Rename "config" to "jsonConfig" to make it clearer
* Requested changes
* Requested changes: XormLogger
* Try to color the windows terminal
If successful default to colorizing the console logs
* fixup
* Colorize initially too
* update vendor
* Colorize logs on default and remove if this is not a colorizing logger
* Fix documentation
* fix test
* Use go-isatty to detect if on windows we are on msys or cygwin
* Fix spelling mistake
* Add missing vendors
* More changes
* Rationalise the ANSI writer protection
* Adjust colors on advice from @0x5c
* Make Flags a comma separated list
* Move to use the windows constant for ENABLE_VIRTUAL_TERMINAL_PROCESSING
* Ensure matching is done on the non-colored message - to simpify EXPRESSION
* add global code search on explore
* fix bug when no anyone public repos
* change the icon
* fix typo and add UnitTypeCode check for login non-admin user
* fix ui description when no match
